PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.5699s0010.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 128aa    MW: 14163.4 Da    PI: 6.7551
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.5699s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.93.3e-0961116148
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikevd....iykvePwdLp 48 
                             lp+G++F+Ptd el+ e+L+ kv +++       +++  +i+++d    i++++P++Lp
  SapurV1A.5699s0010.1.p  61 LPAGVKFDPTDLELL-EHLEGKVLKSDtckvhplIDE--FIPTIDgengICYTHPEKLP 116
                             799************.99****999887776543222..3444444445*********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-953119IPR003441NAC domain
PROSITE profilePS5100511.09861127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MTWCNGVCKN VQTIERSSPP PCKASTVLAQ EHKECLIRSC PSCGHQMRCR DQARIHDLPG  60
LPAGVKFDPT DLELLEHLEG KVLKSDTCKV HPLIDEFIPT IDGENGICYT HPEKLPGDNI  120
PGMLKRY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB9707931e-121AB970793.1 Populus nigra PniNAC122 mRNA for NAC transcriptional factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002309767.17e-71no apical meristem family protein
RefseqXP_011047704.16e-71PREDICTED: NAC domain-containing protein 8-like
RefseqXP_011047705.16e-71PREDICTED: NAC domain-containing protein 8-like
SwissprotO494591e-47NAC73_ARATH; NAC domain-containing protein 73
TrEMBLB9HGS28e-71B9HGS2_POPTR; No apical meristem family protein
STRINGPOPTR_0007s01350.12e-70(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1752645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.19e-49NAC domain containing protein 73